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From: F1000 Biology Update
To: Jeff Epstein cjeeproject®yahoo.com>
Subject: Is sitting down bad for you? Do your mice arrive with hidden baggage? And much more!
Date: Mon, 01 Jun 2009 16:06:35 +0000
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Major Advances. Expert Opinions.
In this issue...
F1000 Biology Reports
Editor's choice: Is sitting down bad for you?
Take advantage of limited full access to some of F1000 Biology's most popular recent evaluations
Broad impact: New co-catalytic role found for scaffolding protein Ste5 in yeast
Is your Institution the Best Place to Work in Academia?
Hidden Jewel: "Do your mice arrive with hidden baggage?"
F1000 on Twitter, Facebook and LinkedIn!
Recommend F1000 to your librarian!
Faculty of 1000 Biology Posters
F1000 Biology Reports
See the latest issue of F 1000 Biology Reports which contains
8 new articles, including one entitled Describing protein r ',[F1000 Reports Logo]
conformational ensembles: beyond static snapshots by
Structural Biology Section Head George N Philips.
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Editor's choice: Is sitting down bad for you?
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After years of health campaigns, we all know that lack of exercise is bad for our health, and
many of us take time out of our day to do some physical activity. The authors of this paper,
evaluated by Craig Harms of the Physiology. Faculty, with Sara K Rosenkranz, suggest that,
regardless of exercise levels, the amount of time spent sitting down each day has a
detrimental effect on our health.
Dr Harms writes
"The interesting findings from this study are that there appears to be a dose-response
relationship between sitting time and mortality from all causes and CVD, and that this
association is independent of whether or not the person is physically active outside of the
sedentary time."
Dr Harms ex lains
"It appears that it is not just a lack of exercise which increases the risk of mortality, but the
quantity of sitting time."
He also goes on to say
"The authors propose that future physical activity guidelines may need to include
recommendations which address daily sitting time. They present strong evidence for such
future recommendations."
Read the comments in full
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Take advantage of limited full access to some of FI000 Biology's most popular recent
evaluations
In this landmark paper, the Cross group identifies histone variants that mark RNA
polymerase II promoters and terminators, and maps all such promoters in the genome
— including many previously unidentified ones where there is no direction change...
MORE
Selected by 'Christine Clayton (University of Heidelberg, Germany)
Four histone variants mark the boundaries of pAycistronic
transcription units in Trypanosoma brucei.
.t,,,,, 9.0
Siegel TN et al. Genes Dev 2009 May 123(9):1063-76
This paper represents a significant advance in the way that induced pluripotent stem
(iPS) cells are generated by demonstrating that these cells can be made by the delivery
of a set of recombinant proteins rather than by gene transfection...MORE
Selected by 'William H Colledge (University of Cambridge, UK)
ige Read
Generation of induced pluripotent stem cells using recombinant
proteins.
FI000 Factor 6.4
Zhou H et al. Cell Stern Cell 2009 May 8 4(5):381-4
Cebrian and colleagues present the first empirical demonstration that the nutritional
quality of primary producers controls the trophic structure of ecosystems...MORE
Selected b 'Kai Chan (University of British Columbia, Canada) with Rebecca Martone
Producer nutritional quality controls ecosystem trophic structure.
F1000 Factor 6.0 Cebrian J et al. PLoS ONE 2009 4(3):e4929
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The results in this manuscript help to nullify recent doubts concerning the validity of
the lipid raft concept by directly demonstrating that such segregation exists following
receptor occupancy...MORE
Selected by IE. Charles Snow (University of Kentucky Medical Center, USA)
Accumulation of raft lipids in T-cell plasma membrane domains
engaged in TCR signalling.
F1000 Factor 6.0
I Zech T et al. EMBO J 2009 Mar 4 28(5):466-76
Placebos provide more effective pain relief to people who are reward-seekers than to
individuals with different personalities, according to this intriguing study...MORE
Selected by 'Kent Berridge (University of Michigan, USA)
The anatomy of the mesolimbic reward system: a link between
LWI personality and the placebo analgesic response.
11111 i ).0
Schweinhardt Petal..! Neurosci 2009 Apr 15 29(15):4882-7
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ot., Broad Impact: New co-catalytic role found for scaffolding protein SteS in yeast
The scaffold protein Ste5 has long been known to facilitate the directional flow of mitogen-
activated protein kinase (MAPK) intracellular pathways in yeast by recruiting signalling
molecules. However, in this recent 'Must Read' article highlighted on Faculty of 1000 the
authors identify an additional catalytic role.
Moosa Mohammadi of the Structural Biology Faculty, with Andrew Beenken, explains
"They show that the MAPK Fus3 is recruited to the Ste5-bound mitogen-activated protein
kinase kinase (MAPICIC) Ste7, enabling Ste5 to unlock the A-loop conformation of Fus3
and turn it into a better substrate for Ste7."
Plant Biology Faculty Member, Dominique Bergmann, feels this raises some questions about
applying the idea to other organisms, including mammals.
"SteS is a wonderful binary switch - allowing a single MAPKK to choose between two
MAPKs. But what happens when a single MAPKK has more than two MAPK targets to
choose from? This is the general situation in plants (Arabidopsis, for example, must
contend with 10 MAPICICs and 20 MAPICs). How many activities might we find these
scaffolds capable of that would allow them to discriminate among many potential targets?"
Jane Endicott of the Cell Biology Faculty, believes
"whatever the outcome of that future work, this paper will ensure a significant revising of
our current models for how scaffold proteins work!"
The structure of Faculty of 1000 Biology makes it possible to identify papers of broad
interest, irrespective of the journal in which they are published. You can see the full
comments of all the evaluating Faculty Members on this 'Must Read' Broad Impact paper by
visiting the Faculty of 1000 Biology website.
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Is your Institution the Best Place to Work in Academia?
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The Scientist's annual Best Places to Work in Academia survey is cientist Survey
now open. Are you a tenured, permanent, or tenure-track scientist
working in an academic, hospital, government or private
organization? Do you think your organization is a great place to
teach? To do research? Does it leave you personally fulfilled? What
Take the survey now.
areas could improve?
The Scientist wants to hear what you think about your place of work. After all, a stellar
institutional ranking for your employer reflects positively on you. If you're not satisfied, then
this is your chance to voice your concerns anonymously. Institutions really do consider the
results of this survey and listen.
Complete the survey today and you'll also be entered to win a $250 Amazon gift card - but
only if you respond by July 3, 2009.
The results will be published in The Scientist's November 2009 issue. Help us help you - Tell
your colleagues about the survey by passing this email around! The more responses we
receive, the more accurate the results will be. Thank you for your time. We appreciate your
contribution!
See last year's results: 2008 Best Place to Work in Academia Survey results
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Hidden Jewel: "Do your mice arrive with hidden baggage?"
The authors of this enlightening paper, evaluated by Susan Akana of the Physiology Faculty
look at the effect of shipping age of laboratory mice on later reproductive behaviour and
make an interesting and worrying observation that could impact on reproductive behavioural
studies.
Susan writes
"This paper clearly details that female mice shipped during the peripubertal period
demonstrate a lower index of reproductive behaviour in mature adulthood."
She notes the wide-reaching consequences of such a finding, aying that,
"Because many laboratories purchase rodents at this age (5-6 weeks), it behooves
investigators to re-inspect their own data and research models to ensure their experimental
outcomes are not confounded or nuanced by these findings."
She concludes
"These studies are a strong cautionary note on interpreting rodent sexual behaviour without
knowing the shipping history of the subjects."
[See full evaluation]
The Hidden Jewels lists are one of the most popular features on the Faculty of 1000 Biology
site as they bring to scientists' attention papers they otherwise might have missed (especially
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in fields adjacent to their own). These lists are compiled daily and include highly viewed
papers evaluated within the previous month.
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